src.domains.motif_hyphen_space module#

class MotifHyphenSpace(dct, alphabet=None, motiflength=None, units='bits', _callingfrommake=False)[source]#

Bases: MotifSpace

Domain of Motif Hyphens, like motif breakage rate constants, ligations projected onto motif space.

static make(alphabet, motiflength, units: Quantity = None)[source]#

Creates a MultiDomain object from a dictionary of names and domains

Parameters:: inp (MultiDomain or dict{name: DomainTuple}) – The already built MultiDomain or a dictionary of DomainTuples
Return type:: A MultiDomain with the input Domains as domains

property motiflength#

property alphabet#

property number_of_letters#

property units#

make_hyphen_dct(alphabet: list, motiflength: int) → dict[source]#: Creates a motif hyphen dictionary. Parameters: ———– alphabet : list motiflength : int,

Returns:#

motif_hyphen_dct : dict