src.domains.motif_space module#

make_hamming_dct(alphabet, motiflength, monomers_included=True)[source]#

class MotifSpace(dct, alphabet=None, motiflength=None, units='bits', _callingfrommake=False)[source]#

Bases: MultiDomain

__init__(dct, alphabet=None, motiflength=None, units='bits', _callingfrommake=False)[source]#

static make(alphabet, motiflength, units: Quantity = None, monomers_included=True)[source]#

Creates a MultiDomain object from a dictionary of names and domains

Parameters:: inp (MultiDomain or dict{name: DomainTuple}) – The already built MultiDomain or a dictionary of DomainTuples
Return type:: A MultiDomain with the input Domains as domains

property motiflength#

property alphabet#

property number_of_letters#

property units#